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The last 5 uploaded publications
Accelerated evolution of SARS-CoV-2 in free-ranging white-tailed deer
Dillon S. McBride, Sofya K. Garushyants, John Franks, Andrew F. Magee, Steven H. Overend, Devra Huey, Amanda M. Williams, Seth A. Faith, Ahmed Kandeil, Sanja Trifkovic, Lance A. Miller, Trushar Jeevan, Anami Patel, Jacqueline M. Nolting, Michael J. Tonkovich, J. Tyler Genders, Andrew J. Montoney, Kevin Kasnyik, Timothy Linder, Sarah N. Bevins, Julianna B. Lenoch, Jeffrey C. Chandler, Thomas J. DeLiberto, Eugene V Koonin, Marc A. Suchard, Philippe Lemey, Richard J. Webby, Martha I. Nelson, Andrew S. Bowman (2023). Accelerated evolution of SARS-CoV-2 in free-ranging white-tailed deer. , 14(1), DOI: https://doi.org/10.1038/s41467-023-40706-y.
Article92 days agoEvolution of antivirus defense in prokaryotes, depending on the environmental virus prevalence and virome dynamics
S. G. Babajanyan, Sofya K. Garushyants, Yuri I. Wolf, Eugene V Koonin (2025). Evolution of antivirus defense in prokaryotes, depending on the environmental virus prevalence and virome dynamics. , 16(10), DOI: https://doi.org/10.1128/mbio.02409-25.
Article92 days agoMicrobial diversity and ecological complexity emerging from environmental variation and horizontal gene transfer in a simple mathematical model
S. G. Babajanyan, Sofya K. Garushyants, Yuri I. Wolf, Eugene V Koonin (2024). Microbial diversity and ecological complexity emerging from environmental variation and horizontal gene transfer in a simple mathematical model. , DOI: https://doi.org/10.1101/2024.01.17.576128.
Preprint92 days agoYprA family helicases provide the missing link between diverse prokaryotic immune systems
Ryan T. Bell, Thomas Gaudin, Yi Wu, Sofya K. Garushyants, Harutyun Sahakyan, Kira S. Makarova, Yuri I. Wolf, Simon A. Jackson, Franklin L Nobrega, Chase L. Beisel, Eugene V Koonin (2025). YprA family helicases provide the missing link between diverse prokaryotic immune systems. , DOI: https://doi.org/10.1101/2025.09.15.676423.
Preprint92 days agoNon-essential ribosomal proteins in bacteria and archaea identified using COGs
Michael Y. Galperin, Yuri I. Wolf, Sofya K. Garushyants, Roberto Vera Alvarez, Eugene V Koonin (2021). Non-essential ribosomal proteins in bacteria and archaea identified using COGs. , DOI: https://doi.org/10.1101/2021.01.31.429008.
Preprint92 days ago