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The last 5 uploaded publications
BIOMEX: an interactive workflow for (single cell) omics data interpretation and visualization
Federico Taverna, Jermaine Goveia, Tobias K. Karakach, Shawez Khan, Kateřina Rohlenová, Lucas Treps, Abhishek Subramanian, Luc Schoonjans, Mieke Dewerchin, Guy Eelen, Peter Carmeliet (2020). BIOMEX: an interactive workflow for (single cell) omics data interpretation and visualization. , 48(W1), DOI: https://doi.org/10.1093/nar/gkaa332.
Article64 days agoCD8+ T cell metabolic rewiring defined by scRNA-seq identifies a critical role of ASNS expression dynamics in T cell differentiation
Juan Fernández-García, Fabien Franco, Sweta Parik, Patricia Altea‐Manzano, Antonino Alejandro Pane, Dorien Broekaert, Joke Van Elsen, Giusy Di Conza, Ines Vermeire, Tessa Schalley, Mélanie Planque, Thomas Van Brussel, Rogier Schepers, Elodie Modave, Tobias K. Karakach, Peter Carmeliet, Diether Lambrechts, Ping‐Chih Ho, Sarah‐Maria Fendt (2022). CD8+ T cell metabolic rewiring defined by scRNA-seq identifies a critical role of ASNS expression dynamics in T cell differentiation. , 41(7), DOI: https://doi.org/10.1016/j.celrep.2022.111639.
Article64 days agoClosing the Mitochondrial Permeability Transition Pore in hiPSC-Derived Endothelial Cells Induces Glycocalyx Formation and Functional Maturation
Gesa L. Tiemeier, Gangqi Wang, Sébastien J. Dumas, Wendy Sol, M. Cristina Avramut, Tobias K. Karakach, Valeria V. Orlova, Cathelijne W. van den Berg, Christine L. Mummery, Peter Carmeliet, Bernard M. van den Berg, Ton J. Rabelink (2019). Closing the Mitochondrial Permeability Transition Pore in hiPSC-Derived Endothelial Cells Induces Glycocalyx Formation and Functional Maturation. , 13(5), DOI: https://doi.org/10.1016/j.stemcr.2019.10.005.
Article64 days agoEndoDB: a database of endothelial cell transcriptomics data
Shawez Khan, Federico Taverna, Kateřina Rohlenová, Lucas Treps, Vincent Geldhof, Laura de Rooij, Liliana Sokol, Andreas Pircher, Lena‐Christin Conradi, Joanna Kalucka, Luc Schoonjans, Guy Eelen, Mieke Dewerchin, Tobias K. Karakach, Xuri Li, Jermaine Goveia, Peter Carmeliet (2018). EndoDB: a database of endothelial cell transcriptomics data. , 47(D1), DOI: https://doi.org/10.1093/nar/gky997.
Article64 days agoSingle-Cell RNA Sequencing Maps Endothelial Metabolic Plasticity in Pathological Angiogenesis
Kateřina Rohlenová, Jermaine Goveia, Melissa García‐Caballero, Abhishek Subramanian, Joanna Kalucka, Lucas Treps, Kim D. Falkenberg, Laura de Rooij, Yingfeng Zheng, Lin Lin, Liliana Sokol, Laure-Anne Teuwen, Vincent Geldhof, Federico Taverna, Andreas Pircher, Lena‐Christin Conradi, Shawez Khan, Steve Stegen, Dena Panovska, Frederik De Smet, Frank J. T. Staal, René McLaughlin, Stefan Vinckier, Tine Van Bergen, Nadine Ectors, Patrik De Haes, Jian Wang, Lars Bolund, Luc Schoonjans, Tobias K. Karakach, Huanming Yang, Geert Carmeliet, Yizhi Liu, Bernard Thienpont, Mieke Dewerchin, Guy Eelen, Xuri Li, Yonglun Luo, Peter Carmeliet (2020). Single-Cell RNA Sequencing Maps Endothelial Metabolic Plasticity in Pathological Angiogenesis. , 31(4), DOI: https://doi.org/10.1016/j.cmet.2020.03.009.
Article64 days ago