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The last 5 uploaded publications
“<i>Paraxenoviridae</i>”, a putative family of globally distributed marine bacteriophages with double-stranded RNA genomes
Mitsuhiro Yoshida, Sofia Medvedeva, Akihito Fukudome, Yuri I. Wolf, Syun‐ichi Urayama, Yosuke Nishimura, Yoshihiro Takaki, Eugene V Koonin, Mart Krupovìč, Takuro Nunoura (2025). “<i>Paraxenoviridae</i>”, a putative family of globally distributed marine bacteriophages with double-stranded RNA genomes. , 19(1), DOI: https://doi.org/10.1093/ismejo/wraf139.
Article135 days agoDouble-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan
Syun‐ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovìč, Takuro Nunoura (2024). Double-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan. , 9(2), DOI: https://doi.org/10.1038/s41564-023-01579-5.
Article135 days agoSummary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses (ICTV) from the Bacterial Viruses Subcommittee, 2025
Dann Turner, Evelien M. Adriaenssens, Rudolf Amann, Pavol Bárdy, Nina Bartlau, Jakub Barylski, Stanisław Błażejak, Majid Bouzari, Ariane Briegel, Yves Briers, Daniel Carrillo, Xia Chen, Dennis Claessen, Ryan Cook, Marco A. Crisci, Arnaud Dechesne, Paulina Deptula, Bas E. Dutilh, Bert Ely, Lars Fieseler, Paul C. M. Fogg, Akihito Fukudome, Mohammed Saeed Ganjoor, Iwona Gientka, Karin Holmfeldt, Panos G. Kalatzis, Kathryn M. Kauffman, Annabel Kempff, Petar Knežević, Eugene V Koonin, Andrew M. Kropinski, Mart Krupovìč, D. İpek Kurtböke, Kai S Lambon, Rob Lavigne, Susan M. Lehman, Hui Liu, Cédric Lood, Rudi Lurz, Sari Mäntynen, Cole B. Matrishin, Mathias Middelboe, Andrew Millard, Cristina Moraru, Dennis Sandris Nielsen, Franklin L Nobrega, Takuro Nunoura, Hanna M. Oksanen, Véronique Ongenae, Boris Parra, Célia Pas, Joseph Pogliano, Minna M. Poranen, Siravudh Potipimpanon, Amy Prichard, Hannah V. Pye, Daniela Rothschild-Rodriguez, Daniel E. Rozen, Joanne M. Santini, Sha Yu, Dziyana Shymialevich, Barbara Sokołowska, Abbas Soleimani-Delfan, Paulina Średnicka, Paulo Tavares, Andrea Telatin, Igor Tolstoy, Shyun-ichi Urayama, Vera van Neer, Finn K. Vogensen, Qiannan Wen, Antje Wichels, Michał Wójcicki (2025). Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses (ICTV) from the Bacterial Viruses Subcommittee, 2025. , 106(7), DOI: https://doi.org/10.1099/jgv.0.002111.
Article135 days agoIdentification of Obelisk-like covalently closed circular RNA replicon in hot springs by double-stranded RNA sequencing and expansion of the diversity of the Obelisk superfamily
Syun‐ichi Urayama, Akihito Fukudome, Pascal Mutz, Yosuke Matsushita, Yoshihiro Takaki, Yosuke Nishimura, Sofia Medvedeva, Mart Krupovìč, Eugene V Koonin, Takuro Nunoura (2025). Identification of Obelisk-like covalently closed circular RNA replicon in hot springs by double-stranded RNA sequencing and expansion of the diversity of the Obelisk superfamily. , DOI: https://doi.org/10.1101/2025.09.03.673927.
Preprint135 days agoDistinct groups of RNA viruses associated with thermoacidophilic bacteria
Syun‐ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovìč, Takuro Nunoura (2023). Distinct groups of RNA viruses associated with thermoacidophilic bacteria. , DOI: https://doi.org/10.1101/2023.07.02.547447.
Preprint135 days ago