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The last 5 uploaded publications
Buffering of genetic defects in animal development by regeneration programs
Kazunori Ando, Sushant Bangru, John Welsby, John D Thompson, Kenneth D. Poss (2025). Buffering of genetic defects in animal development by regeneration programs. , DOI: https://doi.org/10.1101/2025.10.25.684558.
Preprint113 days agoA screen for regeneration-associated silencer regulatory elements in zebrafish
Kazunori Ando, Jianhong Ou, John D Thompson, John Welsby, Sushant Bangru, Jingwen Shen, Xiaolin Wei, Yarui Diao, Kenneth D. Poss (2024). A screen for regeneration-associated silencer regulatory elements in zebrafish. , 59(5), DOI: https://doi.org/10.1016/j.devcel.2024.01.004.
Article113 days agoDGEobj.utils: Differential Gene Expression (DGE) Analysis Utility Toolkit
John D Thompson, Connie Brett, Isaac Neuhaus, Ryan ThompsonDGEobj.utils: Differential Gene Expression (DGE) Analysis Utility Toolkit. , DOI: https://doi.org/10.32614/cran.package.dgeobj.utils.
Dataset113 days agoLineage-defined leiomyosarcoma subtypes emerge years before diagnosis and determine patient survival
Nathaniel D. Anderson, Yael Babichev, Fabio Fuligni, Federico Comitani, Mehdi Layeghifard, Rosemarie E. Venier, Stefan C. Dentro, Anant Maheshwari, Sheena Guram, Claire Wunker, John D Thompson, Kyoko E. Yuki, Huayun Hou, Matthew Zatzman, Nicholas Light, Marcus Q. Bernardini, Jay S. Wunder, Irene L. Andrulis, Peter C. Ferguson, Albiruni R. Abdul Razak, Carol J. Swallow, James J. Dowling, Rima Al‐awar, Richard Marcellus, Marjan Rouzbahman, Moritz Gerstung, Daniel Durocher, Ludmil B. Alexandrov, Brendan C. Dickson, Rebecca A. Gladdy, Adam Shlien (2021). Lineage-defined leiomyosarcoma subtypes emerge years before diagnosis and determine patient survival. , 12(1), DOI: https://doi.org/10.1038/s41467-021-24677-6.
Article113 days agoDifferential Gene Expression (DGE) Analysis Results Data Object [R package DGEobj version 1.0.3]
John D Thompson, Connie Brett, Isaac Neuhaus, Ryan Thompson (2021). Differential Gene Expression (DGE) Analysis Results Data Object [R package DGEobj version 1.0.3].
Article113 days ago