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  5. Treatment of Halogen Bonding in the OPLS-AA Force Field: Application to Potent Anti-HIV Agents

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Article
English
2012

Treatment of Halogen Bonding in the OPLS-AA Force Field: Application to Potent Anti-HIV Agents

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English
2012
Journal of Chemical Theory and Computation
Vol 8 (10)
DOI: 10.1021/ct300180w

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William L. Jorgensen
William L. Jorgensen

Yale University

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William L. Jorgensen
Patric Schyman

Abstract

The representation of chlorine, bromine, and iodine in aryl halides has been modified in the OPLS-AA and OPLS/CM1A force fields in order to incorporate halogen bonding. The enhanced force fields, OPLS-AAx and OPLS/CM1Ax, have been tested in calculations on gas-phase complexes of halobenzenes with Lewis bases, and for free energies of hydration, densities, and heats of vaporization of halobenzenes. Comparisons with results of MP2/aug-cc-pVDZ(-PP) calculations for the complexes are included. Implementation in the MCPRO software also allowed computation of relative free energies of binding for a series of HIV reverse transcriptase inhibitors via Monte Carlo/free-energy perturbation calculations. The results support the notion that the activity of an unusually potent chloro analog likely benefits from halogen bonding with the carbonyl group of a proline residue.

How to cite this publication

William L. Jorgensen, Patric Schyman (2012). Treatment of Halogen Bonding in the OPLS-AA Force Field: Application to Potent Anti-HIV Agents. Journal of Chemical Theory and Computation, 8(10), pp. 3895-3901, DOI: 10.1021/ct300180w.

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Publication Details

Type

Article

Year

2012

Authors

2

Datasets

0

Total Files

0

Language

English

Journal

Journal of Chemical Theory and Computation

DOI

10.1021/ct300180w

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