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  5. Genetic justification of <scp>COVID</scp>‐19 patient outcomes using <scp>DERGA</scp>, a novel data ensemble refinement greedy algorithm

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Article
English
2024

Genetic justification of <scp>COVID</scp>‐19 patient outcomes using <scp>DERGA</scp>, a novel data ensemble refinement greedy algorithm

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English
2024
Journal of Cellular and Molecular Medicine
Vol 28 (4)
DOI: 10.1111/jcmm.18105

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Amir Gandomi
Amir Gandomi

University of Techology Sdyney

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Panagiotis G. Asteris
Amir Gandomi
Danial Jahed Armaghani
+25 more

Abstract

Complement inhibition has shown promise in various disorders, including COVID‐19. A prediction tool including complement genetic variants is vital. This study aims to identify crucial complement‐related variants and determine an optimal pattern for accurate disease outcome prediction. Genetic data from 204 COVID‐19 patients hospitalized between April 2020 and April 2021 at three referral centres were analysed using an artificial intelligence‐based algorithm to predict disease outcome (ICU vs. non‐ICU admission). A recently introduced alpha‐index identified the 30 most predictive genetic variants. DERGA algorithm, which employs multiple classification algorithms, determined the optimal pattern of these key variants, resulting in 97% accuracy for predicting disease outcome. Individual variations ranged from 40 to 161 variants per patient, with 977 total variants detected. This study demonstrates the utility of alpha‐index in ranking a substantial number of genetic variants. This approach enables the implementation of well‐established classification algorithms that effectively determine the relevance of genetic variants in predicting outcomes with high accuracy.

How to cite this publication

Panagiotis G. Asteris, Amir Gandomi, Danial Jahed Armaghani, Markos Z. Tsoukalas, Eleni Gavriilaki, Gloria F. Gerber, Gerasimos Konstantakatos, Athanasia D. Skentou, Leonidas Triantafyllidis, Nikolaos Kotsiou, Evan M. Braunstein, Hang Chen, Robert A. Brodsky, Tasoula Touloumenidou, Ioanna Sakellari, Nizar Faisal Alkayem, Abidhan Bardhan, Maosen Cao, Liborio Cavaleri, Antonio Formisano, Deniz Güney, Mahdi Hasanipanah, Manoj Khandelwal, Ahmed Salih Mohammed, Pijush Samui, Jian Zhou, Evangelos Terpos, Meletios Α. Dimopoulos (2024). Genetic justification of <scp>COVID</scp>‐19 patient outcomes using <scp>DERGA</scp>, a novel data ensemble refinement greedy algorithm. Journal of Cellular and Molecular Medicine, 28(4), DOI: 10.1111/jcmm.18105.

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Publication Details

Type

Article

Year

2024

Authors

28

Datasets

0

Total Files

0

Language

English

Journal

Journal of Cellular and Molecular Medicine

DOI

10.1111/jcmm.18105

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